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| mgx_EXPORT bool | mgx::subdivideBisect (vvGraph &S, const vertex &v1, const vertex &v2, const vertex &v3, VtxVec *vs=0, Subdivide *sDiv=0) |
| | Subdivide triangle with a propagating bisection that gives good triangles. More...
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| template<typename GraphT > |
| bool | mgx::spliceNhbs (GraphT &S, typename GraphT::vertex_t a, typename GraphT::vertex_t b) |
| | Splice the neighborhood of b into a (so we can delete b) More...
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| mgx_EXPORT int | mgx::getLabel (const vertex &v1, const vertex &v2, const vertex &v3) |
| | Return the label for a triangle. More...
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| mgx_EXPORT bool | mgx::getLabelCount (const vvGraph &S, VtxIntMap &labCount) |
| | Count labels for each vertex in the graph. More...
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| mgx_EXPORT bool | mgx::splitEdge (vvGraph &S, vertex v1, vertex v2, Subdivide *sDiv=0) |
| | Split an edge in the S graph. More...
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| mgx_EXPORT int | mgx::mergeVertices (vvGraph &S, const VtxVec &vs) |
| | Merge vertices, returns number of vertices deleted. More...
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| mgx_EXPORT bool | mgx::checkBorderTris (const vvGraph &S, bool select=true) |
| | Check for unlabeled vertices, border triangles and islands of label in preparation to make a cell mesh. More...
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| mgx_EXPORT bool | mgx::deleteCells (vvGraph &S, const VtxVec &V) |
| | Check for unlabeled vertices, border triangles and islands of label in preparation to make a cell mesh. More...
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| mgx_EXPORT int | mgx::fixBorderTris (vvGraph &S) |
| | Check for border triangles with all labels -1 and merge their vertices together. More...
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| mgx_EXPORT bool | mgx::mgxmToMgxc (const vvGraph &srcS, vvGraph &S, double wallMax=0) |
| | Convert a normal (MGXM) mesh to a cell (MGXC) mesh. More...
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| mgx_EXPORT void | mgx::markMargins (vvGraph &M, vvGraph &S, bool remborders=true) |
| | Mark the cells and tissue margin vertices. More...
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| mgx_EXPORT void | mgx::markMargins (vvGraph &S, bool remborders=true) |
| | Mark the cells and tissue margin vertices. More...
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| mgx_EXPORT void | mgx::markMargin (vvGraph &S, vertex v, bool remborders=true) |
| | Mark the cells and tissue margin vertices. More...
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| mgx_EXPORT int | mgx::setNormals (const vvGraph &S) |
| | Set the normals in a graph. More...
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| mgx_EXPORT void | mgx::correctNormals (vvGraph &S) |
| | Correct MGXC normals (happens for non-star shaped cells) More...
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| mgx_EXPORT bool | mgx::setNormal (const vvGraph &S, const vertex &v) |
| | Set the normal in a single vertex. More...
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| mgx_EXPORT bool | mgx::calcNormal (const vvGraph &S, const vertex &v, Point3d &nrml) |
| | Set the normal in a single vertex. More...
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| mgx_EXPORT bool | mgx::neighborhoodGraph (const vvGraph &S, double tolerance, NhbdGraphInfo &info, bool throwError=true) |
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| mgx_EXPORT std::vector< int > | mgx::findAllLabels (const vvGraph &S) |
| | return ALL labels of a vvGraph originally in CellAtlas, now also used in other AddOns More...
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| mgx_EXPORT std::set< int > | mgx::findAllLabelsSet (const vvGraph &S) |
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| mgx_EXPORT std::set< int > | mgx::findAllSelectedLabels (const vvGraph &S) |
| | return ALL labels of selected vertices of a vvGraph originally in CellAtlas, now also used in other AddOns More...
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| mgx_EXPORT void | mgx::neighborhood2D (vvGraph &S, std::map< IntInt, double > &neighMap, QString weightType="", bool ignoreOutside=true) |
| | creates a wall map with the neighboring cells as key (pair) and the wall length as value More...
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| mgx_EXPORT vertex | mgx::nearestVertexOnMesh (const Point3d &targetPoint, const vvGraph &S) |
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| mgx_EXPORT Point3d | mgx::nearestPointOnMesh (const Point3d &targetPoint, const vvGraph &S) |
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| mgx_EXPORT std::map< int, double > | mgx::dijkstra (vvGraph &S, std::map< IntInt, double > &wallAreas, std::set< int > &selectedCells, bool equalWeights, double cutOffDistance, double wallThreshold) |
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| mgx_EXPORT std::map< int, double > | mgx::dijkstra (std::set< int > &allCellLabels, std::map< IntInt, double > &wallAreas, std::set< int > &selectedCells, bool equalWeights, double cutOffDistance, double wallThreshold) |
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| mgx_EXPORT std::map< int, double > | mgx::dijkstra (std::set< int > &allCellLabels, std::map< IntInt, double > &wallAreas, std::map< int, double > &initialCells, bool equalWeights, double cutOffDistance, double wallThreshold) |
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| mgx_EXPORT std::set< int > | mgx::aStar (std::vector< int > &uniqueLabels, std::map< int, Point3d > &cellCentroids, std::map< IntInt, double > &wallAreas, int label1, int label2, double wallThreshold, bool equalWeights) |
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| mgx_EXPORT bool | mgx::findIntersectPoint (Point3d coordCellCentroid, Point3d &dirVec, std::vector< Triangle > &cellTriangles, int &stopCounter, Point3d &intersectP) |
| | shoots rays from the cell centroid along a direction and checks if it hits any of the cell triangles too avoid shooting through the edge between triangles the centroid point is varied slightly if nothing is hit More...
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| mgx_EXPORT double | mgx::estimateCellLength (int currentLabel, Point3d coordCellCentroid, Point3d &dirVec, triVector &cellTriangles) |
| | estimates the size of the cell in a given direction by shooting two rays in a specified direction and its opposite More...
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| mgx_EXPORT void | mgx::generateLabelTriangleMap (const vvGraph &S, std::map< int, triVector > &cellTriangles) |
| | goes through all triangles of the vvGraph and builds up a map from label to triangle vector More...
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| mgx_EXPORT std::map< int, std::vector< vertex > > | mgx::generateLabelVertexMap (const vvGraph &S) |
| | goes through all vertices of the vvGraph and builds up a map from label to vertex vector More...
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| mgx_EXPORT void | mgx::findBorderVerticesOfCell (vvGraph &S, int cellLabel, std::set< vertex > &verticesCell, std::vector< vertex > &borderVerticesOrdered) |
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| mgx_EXPORT void | mgx::findBorderVerticesOfCellsCombined (vvGraph &S, std::set< int > cellLabels, std::set< vertex > &verticesCells, std::vector< vertex > &borderVerticesOrdered) |
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| mgx_EXPORT Point3i | mgx::triIndex (Point3i t) |
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| mgx_EXPORT int | mgx::vIndex (const Point3d &pos, Point3dIntMap &vMap, float tolerance) |
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| mgx_EXPORT int | mgx::getKeyOfMaxValue (const std::map< int, double > &mapToTest) |
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| mgx_EXPORT std::map< int, int > | mgx::shiftMap (std::map< int, double > &mapToShift, int shift) |
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