| assignColumella(int labelRootCap, int labelCol, double rat_val, double sca_val) | mgx::RootCellProcessing | |
| assignCortCells(int labelCort, std::vector< double > &sSmooth, std::map< int, Point3d > &bMapS, int length) | mgx::RootCellProcessing | |
| assignCortCellsGetMinMax(int labelCort, double &minS, double &maxS) | mgx::RootCellProcessing | |
| assignRootRegions() | mgx::RootCellProcessing | |
| associateNearestCluster(heatMapDataStructure &body) | mgx::RootCellProcessing | |
| clusterCells(heatMapDataStructure &body) | mgx::RootCellProcessing | |
| columella | mgx::RootCellProcessing | |
| config | mgx::RootCellProcessing | |
| correctDirections() | mgx::RootCellProcessing | |
| createHeatMapNoCellAtlas(AttrMap< int, double > &dataX, AttrMap< int, double > &dataY) | mgx::RootCellProcessing | |
| data | mgx::RootCellProcessing | |
| delIdx(heatMapDataStructure &body, int idx) | mgx::RootCellProcessing | |
| findAutomaticCluster(heatMapDataStructure &body, int nrOfClusters) | mgx::RootCellProcessing | |
| findHeatStatistics(heatMapDataStructure &body) | mgx::RootCellProcessing | |
| findHighMax(heatMapDataStructure &body) | mgx::RootCellProcessing | |
| findMaxima(cellMorphLandscape &landsc) | mgx::RootCellProcessing | |
| generateCellMorphologyLandscape(heatMapDataStructure &body) | mgx::RootCellProcessing | |
| geometryBasedLabelling() | mgx::RootCellProcessing | |
| getMapFromAttributes(QString mapName) | mgx::RootCellProcessing | |
| initHeatMapDataStructure(heatMapDataStructure &body, double sig, int &chosenX, int &chosenY) | mgx::RootCellProcessing | |
| labelCells(std::map< int, double > &labelToMax, std::map< int, double > &maxToRef, heatMapDataStructure &body) | mgx::RootCellProcessing | |
| labelMap | mgx::RootCellProcessing | |
| mainBody | mgx::RootCellProcessing | |
| minDisToMax(std::map< int, Point2d > &maxima, std::map< int, double > &usedMax, int currentIdx) | mgx::RootCellProcessing | |
| numCells | mgx::RootCellProcessing | |
| outlierDetection | mgx::RootCellProcessing | |
| parentsMap | mgx::RootCellProcessing | |
| pointersSet | mgx::RootCellProcessing | |
| preselectCells(heatMapDataStructure &body) | mgx::RootCellProcessing | |
| prim1 | mgx::RootCellProcessing | |
| prim2 | mgx::RootCellProcessing | |
| radicle | mgx::RootCellProcessing | |
| relateCellstoMaxima(heatMapDataStructure &body, cellMorphLandscape &landsc, std::map< int, double > &x, std::map< int, double > &y, std::map< int, Point2d > maxima) | mgx::RootCellProcessing | |
| resetHeat(heatMapDataStructure &body) | mgx::RootCellProcessing | |
| RootCellProcessing() | mgx::RootCellProcessing | inline |
| rootData | mgx::RootCellProcessing | |
| setAutoCluster(int nrCluster, bool ismainBody) | mgx::RootCellProcessing | |
| setDataPointers(CellAtlasAttr *cellAtlasAttr, CellAtlasConfigAttr *cellAtlasConfigAttr) | mgx::RootCellProcessing | inline |
| setHeatmap(heatMapDataStructure &body, QString optionGUI, int &chosenOption, bool x) | mgx::RootCellProcessing | |
| setParameter(bool outputType, int label1, int label2) | mgx::RootCellProcessing | |
